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Eric Topol Discusses Covid Vaccines Not Meeting Expectations, Breakthrough Cases Sicker

It looks as if conventional wisdom on the Covid vaccines has run head first into some ugly realities. Eric Topol of Scripps, formerly a “Get vaccinated, problem solved” cheerleader, grapples out loud with troubling data about Covid deaths and breakthrough cases with a serious journalist, David Wallace-Wells of New York Magazine. The short version is that both measures are much worse than expected and the trajectory bodes ill.
We’ll go through many of the bad trends Topol and Wallace-Wells identify, including one we hadn’t wanted to believe when IM Doc started telling us of it privately via e-mail weeks ago, and presented in comments yesterday: that his breakthrough cases have been typically sicker than those among the unvaccinated. Topol is seeing the same thing and his population isn’t from IM Doc’s part of the world.
Topol may have fallen for orthodox thinking, but as the founder of Scripps, has tremendous clout and can’t be dismissed, both by virtue of his reputation and because the data he and Wallace-Wells discuss speaks for itself. But the officialdom has bet so heavily on magical vaccines being the solution for Covid that the denialism is likely to remain strong and get even uglier.
As we say often here, it would be better if we were wrong, but it appears we haven’t been. And I don’t like sounding triumhpalist; I felt nauseous during September 2008 when just about everything we said about the credit, mortgage and derivative markets in 2007 and 2008 was proven correct, and then some. However, Topol and Wallace-Wells prove out something we and our experts, IM Doc, GM, KLG and Iganacio have been saying from early on: the vaccines were overhyped. For starters, there was no basis for believing a vaccine for a coronavirus would produce immunity that lasted more than months to at most a year. While the vaccines were under development, data from Imperial College indicated that the rate of decline in neutralizing antibodies from contracting Covid provided immunity on the order of six to eight months. There was no way a vaccine for a respiratory virus would confer sterilizing immunity.
Yet not only did our putative leaders tell outrageous howlers, with both the CDC’s Rochelle Walensky and Biden repeatedly and falsely stating that if you got vaccinated, you would not get Covid (“If youre vaccinated, youre protected”), they also committed the cardinal sin of betting on their own PR. They treated vaccines as the one-stop answer to the Covid problem.
And not only did they actively discourage the use of non-pharmaceutical interventions like masking and social distancing (can’t harsh the mellow of convention sponsors and holiday makers) but they crippled an already slipshod Covid data gathering system by telling public health officials not to collect data on breakthrough cases among the vaccinated. So now we have to rely on figures from less incompetent countries like Israel, and Topol is forced to make back-of-the-envelope computations.
Some of the grim news from Too Many People Are Dying Right Now:
Lower reduction in mortality than expected. Wallace-Wells starts with the expected Covid vaccine death reduction of 90% or at least, per another expert, 75%. That means Covid fatalities should be 25% or lower relative to last year…which is not where we are. Instead, from Wallace-Wells:
But at the national level, at least for the moment, the reduction of mortality risk seems to be considerably smaller. In the worst of the winter surge, the country was registering 250,000 new cases per day; at its peak, that surge was killing roughly 3,000 Americans each day (often a bit above, but with a few dips below). Today, we have a bit more than 100,000 new cases each day, though the numbers are still rising as part of the Delta wave. If we had reduced mortality risk by 75 percent, that would mean about 300 daily deaths. If we had reduced it by 90 percent, it would mean 120. Instead, in our seven-day average, we just passed 500.
Things may be even worse than that, though. In general, epidemiologists expect a lag of a week or two, perhaps more, between case peaks and death peaks… comparing case data from even one week ago with todays death data reveals an even grimmer picture: about 75,000 cases per day then yielding the current average of 500 deaths, suggesting the mortality rate had fallen by less than half since winter. If you work from two-week-old data, it suggests that the mortality rate had hardly fallen at all. Applying the winter ratio to the case load from July 24 would predict an average of 600 daily deaths. On Friday, there were 763.
And Topol:
Just looking at the U.K. and Israel, which had been our guideposts, I thought we would keep the hospitalizations pretty darn low maybe a fourth of where wed been in prior waves. And deaths 10 percent of prior waves. But were not doing that at all. If you look at the log charts of the U.S. and the U.K, youre starting to see some real separation for death. Its certainly going in the wrong direction, and it had been tracking incredibly closely, until recently.
Weaker effectiveness of vaccines. The bold is Wallace-Wells, per the original:
What I just cant understand is why all three things are all moving up together so rapidly. Given everything weve seen in other countries and everything we think we know about the vaccines, even if cases rose dramatically, wed expect much lower rates of hospitalization and death. But were not.Its like we didnt have vaccines. Or worse. I was just putting this talk together and I made the same observation. Im looking at the four waves, and, as you know, in the monster wave, we got to 250,000 cases per day. And at that time we had 120,000 plus hospitalizations [per day]. About half. Whats amazing is, were at about 120,000 cases now, and were over 60,000 hospitalizations.
Its the same ratio.Yeah. So when I look at that, I say, what happened to the vaccines?
Topol also pointed out these results were all that much attributable to low vaccination rates in certain states. Florida, for instance, is the standout mortality state yet is has an average, not low, vaccination rate. Los Angeles County, an early and continuing high infection/death area, has a higher vaccination rate than the US overall. He returns to that issue later:
I mean, one of the worst signals that Ive seen is San Francisco. San Francisco is like Vermont, theyre even a little higher than Vermont for fully vaccinated its 70 percent of the population of San Francisco county and its going through a very substantial hospitalization spike, unlike Vermont.
We flagged this indicator of apparent limited vaccine impact last month (hat tip GM). Admittedly only one week of data, but it showed infection rates were proportional to vaccination rates, implying that the vaccinations weren’t reducing the case count.
Data from Israel pic.twitter.com/Qmu4ZDtN7a
Irene Tosetti (@itosettiMD_MBA) July 10, 2021
Severity of breakthrough cases From Topol:
What Im hearing and Ive been helping with a bunch of patients is that people who are breaking through are getting very sick. Theyre getting Regeneron antibodies.
There may be something to this waning immunity story. Its fuzzy, but the people who are getting hit are more apt to be people who were vaccinated very early. I had a patient in recent days, whos in her 70s. She got vaccinated in January. And, I mean, she almost died. I mean, its just terrible. I think I hope the monoclonals are going to save her life. But she was a healthy 70-year-old lady, and just following her case was illuminating she thought she was protected, but she also wore masks everywhere. She was on guard and still got infected and desperately ill.
It is crazy-making to see Topol act as if he hadn’t considered that the vaccine-induced immunity might wear off in six months or so, particularly when much worse that expected immunity data coming out of Israel (which got pretty much everyone jabbed who was going to be jabbed in Jan-Feb), with efficacy down to 64% in June and 39% in August and Delta being markedly different than wild-type Covid.
And that’s before you get to an elephant in the room that oddly no one appears to have mentioned: immune responses in the elderly are weaker. That is why the good old fashioned flu vaccine has a more potent (and more expensive) version for those over 65. But these vaccines had very thin representation in their clinical trials of the over 65, and effectively none for over 80. So it isn’t hard to think that the vaccine-conferred immunity would be weaker and/or shorter lived in the elderly.
Other researchers were already sounding the alarm:
That is plainly wrong – people die on re infection with variants different to the original infecting virus. Immunity from natural infection decays within 6 months and often earlier
Gupta Lab, Cambridge (@GuptaR_lab) July 11, 2021
The boosters might not work. OMG, Topol dares to say it!
This booster thing is yet another issue, because we dont even know if theyre going to protect against a Delta. I mean, everybodys assuming it, but theres no data. You know, theres some neutralizing antibodies from the Pfizer report in 23 people and theres an Israeli pre-print, it says theres waning immunity without any neutralizing antibodies. So well see. But these are just classic spike-protein boosters. Theres nothing special about them to handle Delta. So I dont know. I mean, I suspect theyre going to provide some protection, but Im not sure Im so confident its going to be great.
Oddly, Topol appears to have missed the Moderna data, which our GM pointed out to us in May, which showed that a third booster shot generated only 40% the level of neutralizing antibodies of the first vaccinations. Again, that translates into some combination of less robust immune responses and shorter immunity.1
* * *
We’ve detected rising anger among our readers about Covid and the lack of good information, and they report if anything being met with even more ire when they try to tell vaccine true believers that things aren’t working out as promised.The credibility of the public health establishment and the establishment generally is on track to take a big hit. We’ve published this observation from GM before, and we believe it bears repeating:
That part about the patients taking it out on their doctors will sadly become an even more common occurrence. In retrospect that was predictable, but you can’t really blame the patients — the medical establishment has been telling them lies for many months, and they see the doctors in front of them as part of one monolithic such entity. In reality it is no such thing — there are the honest doctors directly taking care of patients and then there is the corrupt lying actual high-level establishment, but that is not how the regular people perceive it.
The part about the willing self-deception of the elites is also very important. I too have come to the conclusion that either there is some absurdly nefarious grand conspiracy behind this (not really likely) or it is just stupidity and shortsightedness all around. COVID has shown, again and again and again, that you can ignore it for some time, but eventually you will pay for it. Wuhan CCP officials, Trump, the Tanzanian president, and many others learned that lesson the hard way. And it’s been 18 months of that. And it’s not like it was not known there is antigenic drift with these viruses, or that they have all sorts of tricks up their sleeve yet to be played, or that the vaccine was not going to last (was talked about from the start), or that we were never going to vaccinate enough people to reach herd immunity, etc.. So why would you possibly spend half a year blatantly lying when it was crystal clear from the start that it will backfire eventually? Unless you are indeed that deluded and unable to think rationally about the long term…
Unfortunately, this is rule by MBA, or pathological big organizational behavior, writ large. Too many bosses want to hear only good news from subordinates, which means they engage in cover ups or delays, hoping things will either blow over or they can find someone else to scapegoat. And now we run our country based on short-term careerist calculations.
While we can hope for well deserved days of reckoning to come eventually, too many people will suffer in the meantime due to their negligence and cowardice.
I am looking forward to is the well-deserved pillorying of Rochelle Walensky. We called her as likely to perform poorly as the newly-elevated head of the CDC, but our assessment turns out to have been far too generous. The CDC is a above all a data shop. Topol laments in passing about our inability to do rapid Covid testing, as if this is just some sort of regrettable outcome. It’s not. It’s Walensky’s fault. Getting testing right, and pushing Biden to use the Defense Procurement Act to requisition materials if they were in short supply, should have been a top priority in her first two weeks. Instead it doesn’t even appear to be on her list.
And how about getting more accurate and timely reports out of the various states? Has Walensky gone out into the field to meet a single official to offer CDC help and quietly threaten public embarrassment if they didn’t shape up? I could go on, but she seems to have the same conception of her job as Marcie Frost at CalPERS: being a pretty face for the organization, making PR her priority, and leaving the dirty work to minions.
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.1 From GM via e-mail in July:
When Moderna put out their preprint on the B.1.351 booster (now obsolete with the rise of B.1.617.2):
https://www.medrxiv.org/content/10.1101/2021.05.05.21256716v1
There were two concerning observations there:
1. No neutralization activity left against P.1 and B.1.351 after 6-8 months2. The booster worked, but only increased the neutralizing titers to ~40% of what they were originally against the Wuhan variant and what they are against it when boosted.
Based on the fact that the booster “worked”, OAS was dismissed by most, but this would in fact consistent with an “original antigenic sin” effect — nAbs only got boosted to less than half of the previous level.
But then the AZ booster preprint came out:
https://www.biorxiv.org/content/10.1101/2021.06.08.447308v1
They saw the same <50% boosting against B.1.351, and they also analyzed neutralization against B.1.617.2 and saw that it was even worse against it (B.1.617.2 is antigenically more different from B.1.351 than it is from the wild type).
But they also did several more important experiments:
1. They immunized naive mice with a WT and with a B.1.351 vaccine, single dose2. They immunized naive mice with a mixture of the two
And the neutralization against B.1.351 was still half of what it is against the WT
So one has to conclude that it is the virus itself that is the difference, not an OAS effect.
Hopefully we get such analyses for B.1.617.2 soon, as B.1.351 is probably not going to be relevant moving forward.
GM also noted that the Pfizer vaccine has been functionally equivalent to Moderna and in an e-mail last week, that Moderna’s latest investor update essentially repeats earlier date, with nothing new on Delta.read more

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